Wednesday

Wednesday
10 July 2019
Time Concorde 1+2 Cassiopée Caravelle 2 Saint-Exupéry Ariane 1+2 Guillaumet 1+2

Keynote

10:00

R for better science in less time

Julia Stewart Lowndes

Data handling

Education

Models 1

Shiny

Applications 1

Multivariate analysis

11:30

Enhancements to data tidying

Hadley Wickham

Mathematical Modeling with R: Embedding Computational Thinking into High School Math Classes in the United States

Kenia Wiedemann

A Generalized Framework for Parametric Regression Splines

Georges MonetteJohn Fox

Logging and Analyzing Events in Complex Shiny Apps

Kamil Wais

Application of WRSS in Water and Energy Analysis; An object oriented R package for large-scale water resources operation

Rezgar Arabzadeh

ClustBlock: a package for clustering datasets

Fabien Llobell

11:48

n() cool #dplyr things

Romain Francois

Teaching data science with puzzles

Irene Steves

Regularized estimation of the nominal response model

Michela Battauz

mwshiny: Connecting Shiny Across Multiple Windows

Hannah De Los Santos

An R Package for the Distributed Hydrological Model GEOtop

Emanuele Cordano

ordinalClust: an R package for analyzing ordinal data.

Margot Selosse

12:06

You don't need Spark for this - larger-than-RAM data manipulation with disk.frame

Zhuo Jia Dai

Teaching R and statistics to higher degree research students and industry professionals

Alethea Rea

merlin - mixed effects regression for linear and nonlinear models

Alessandro Gasparini

Shiny app deployment and integration into a custom website gallery

Riccardo PorrecaRoland Schmid

Big data analysis for power plant operational data for optimizing engineering design in R / Shiny

Friedrich-Claus Grueber

funHDDC, a R package to cluster univariate and multivariate functional data

Amandine Schmutz

12:24

Data frames for grouped data: the gdata.frame package

Yves Croissant

ghclass: an R package for managing classes with GitHub

Colin Rundel

Modern likelihood-frequentist inference with the likelihoodAsy package

Ruggero Bellio

Automated Surveys and Reports for Expert Elicitation with Shiny

Machteld Varewyck

Anomaly Detection in R

Priyanga Dilini Talagala

Using the package simple features (sf) for sensitivity analysis

Maikol Solís

12:42

git2rdata: storing dataframes in a plain text format suitable for version control

Thierry Onkelinx

Data Science in a Box

Mine Cetinkaya-Rundel

General-to-Specific (GETS) Modelling with User-Specified Estimators and Models

Genaro Sucarrat

Collective and Point Anomaly Detection in R

Daniel Grose

Visualizing multivariate linear models in R

Michael Friendly

Shiny 2

Applications 2

Social science, marketing & business

Reproducibility

Movement & transport

Bioinformatics 1

14:00

Golem : A Framework for Building Robust & Production Ready Shiny Apps

Vincent Guyader

Using AI and R to help improve the quality and health of your personalised food basket.

Peter Jaksons

Visualisation of open-ended interviews through qualitative coding and cognitive mapping

Frédéric Vanwindekens

Package flextable: a grammar to produce tabular reporting from R

Quentin Fazilleau

Navigating through the R packages for movement

Rocio Joo

Multi-data learning with M-ABC: extending your ABC's

Marijke Van Moerbeke

14:18

Art of the Feature Toggle: Patterns for maintaining and improving Shiny applications over time

Kelly Obriant

Variation of patient turnover on a 30-minutes basis for 3 years: analysis of routine data of a Swiss University Hospital

Sarah N. Musy

choicetools: a package for conjoint analysis and best-worst surveys

Chris Chapman

Connecting R/R Markdown and Microsoft Word using StatTag for Collaborative Reproducibility

Leah Welty

Classes, methods and data analysis for trajectories

Mohammad Mehdi Moradi

Fast and Optimal Peak Detection in Large Genomic Data via the PeakSegDisk Package

Toby Hocking

14:36

Data for all: Empowering teams with scalable Shiny applications

Alexandra TurcanRuan Pearce-Authers

Bridging agent-based modelling and R with nlrx: simulating pedestrian's long-term exposure to air pollution

Hyesop Shin

Robust mediation analysis using the R package robmed

Andreas Alfons

The "Rmd first" method: when projects start with the documentation

Sébastien Rochette

Modelling spatial flows with R

Christine Thomas-Agnan

PEREpigenomics: a shiny app to visualize Roadmap Epigenomics data

Guillaume Devailly

14:54

Best practices for building Shiny enterprise applications

Filip Stachura

Simulation of the physical movement for Machine Learning with R: Simulation of Robot gait Optimization Using GA

Hae-Yoon Jung

propro: Enhancing Discovered Process Models using Bayesian Inference and MCMC

Gert Janssenswillen

R gnumaker: easy Makefile construction for enhancing reproducible research

Peter Baker

R for Transport Planning

Robin Lovelace

clustDRM: an R package and Shiny app for modeling high- throughput dose-response data

Vahid Nassiri

Keynote

16:00

A missing value tour in R

Julie Josse

For the official useR 2019 website, including conference information and tutorial schedule, visit user2019.fr.

Thursday

Thursday
11 July 2019
Time Concorde 1+2 Cassiopée Caravelle 2 Saint-Exupéry Ariane 1+2 Guillaumet 1+2

Keynote

09:15

Shiny's Holy Grail: Interactivity with reproducibility

Joe Cheng

Workflow & development

Text mining

Spatial & time series

Open science, education & community

Biostatistics & epidemiology

10:25

Transitioning between various RMarkdown packages for workflow optimization in academic research; a graduate student's perspective.

Brent Thorne

{polite} - web etiquette for R users

Dmytro Perepolkin

R in the Air

Enrico SpinielliTamara Pejovic

Open-access software for research: beyond data analysis

Saras Windecker

A Shiny Webapp for nutritional reformulation of food products according to French front-of-pack “Nutri-Score” label.

Romane Poinsot

10:30

An Approach to Project Workflow for Professional Biostatistical Services

Paul Stevenson

The R Package sentometrics to Compute, Aggregate and Predict with Textual Sentiment

Samuel Borms

Measuring inequalities from space. Analysis of satellite raster images with R

Piotr Wójcik

Teaching reproducible spatial analysis in R

Angela Li

Using Shiny to track winter pressures in the UK National Health Service (NHS)

Fiona Grimm

10:35

ropsec: a package for easing operations security for the R user

Ildiko Czeller

BibliographeR : a set of tools to help your bibliographic research

Cécile SauderJean Delmotte

SILand: an R package for estimating the spatial influence of landscape

Florence Carpentier

Use aRt to learn algorithms, math, and R

William Chase

antibioticR: An R package to identify resistant populations in environmental bacteria

Thomas Petzoldt

10:40

compareWith - user-friendly diff viewing and VCS interaction

Nicoletta Farabullini

ggwordcloud: a word cloud geometry for ggplot2

Erwan Le Pennec

Spatio-temporal Analysis of Diabrotica Emergence

Rodelyn Jaksons

The evolution and importance of the R-Ladies São Paulo chapter in Brazil

Beatriz Milz

MR studies in R: how to use genetic information for identifying modifiable risk factors

Daniela Mariosa

10:45

goodpractice - A Tool for Good Package Development

Hannah Frick

Die Nutella oder Das Nutella? Grammatical Gender Prediction of German Nouns

Chung-Hong Chan

Navigating spatial data management and analysis in Sustainable Fisheries using a combined R-Python approach

Annette Scheffer

Building Active Community at Your Place

Binod Jung Bogati

Streamlining complex analyses of in-vivo data with INVIVOLDA shiny application

Volha Tryputsen

10:50

rt - R Tools for the Command Line

Jakob Richter

Implementing a Classification and Filtering App for Multilingual Facebook Comments – A Use Case Of Data For Good with R

Johannes Müller

Dealing with the change of administrative divisions over time

Kim Antunez

Scaling useR Communities with Engagement and Retention Models

Eyitayo Alimi

A shiny web application for disease mapping. Making easy the fit of spatio-temporal models.

Aritz Adin

10:55

queryMed: Linking pharmacological and medical knowledge using semantic Web technologies

Nolwenn Le Meur

persephone, seasonal adjustment with an object-oriented wrapper for RJDmetra

Gregor De Cillia

Communities & conferences

Data mining

Models 2

Programming 1

Forecasting

Biostatistics & epidemiology 1

11:30

R for Data Science Online Community

Dennis Irorere

Machine Learning with R: do it with a framework

Eric Lecoutre

Using Rcpp* packages for easy and fast Gibbs sampling MCMC from within R

Ghislain VieilledentJeanne Clément

HTTP Requests For R Users and Package Developers

Scott Chamberlain

Flexible futures for fable functionality

Mitchell O'hara-Wild

Reproducible data science to support outbreak responses: experience from the North Kivu Ebola outbreak

Thibaut Jombart

11:48

Insights from the recent R community development and growth in Latin America

Laura Acion

Building and Benchmarking Automatic Machine Learning Systems

Erin Ledell

A toolbox for fitting non-separable space-time log-Gaussian Cox models using R-INLA

Elias Krainski

R and security

Colin Gillespie

Feature-based Time Series Forecasting

Thiyanga Talagala

Advancing data analytics for field epidemiologists using R: the R4epis innovation project

Zhian Kamvar

12:06

AfricaR

Dennis IrorereShel Kariuki

mlr3: A new modular framework for machine learning with R

Michel Lang

Adaptive Bayesian SLOPE -- High-dimensional Model Selection with Missing Values

Wei Jiang

DRY out your workflow with the usethis package

Jennifer Bryan

Random forests for time series

Benjamin GoehryHui Yan

micemd: a smart multiple imputation R package for missing multilevel data

Vincent Audigier

12:24

The truth about satRdays (panel session, part 1)

Noa TamirColin GillespieRiva QuirogaVincent Warmerdam

mlr3pipelines: Machine Learning Pipelines as Graphs

Bernd Bischl

REndo: An R Package to Address Endogeneity Without External Instrumental Variables

Raluca Gui

Reusing tidyverse code, the easy way

Lionel Henry

Smooth forecasting in R

Ivan Svetunkov

Facilitating external use with user-friendly interfaces: a health policy model case study

Iryna Schlackow

12:42

The truth about satRdays (panel session, part 2)

Noa TamirColin GillespieRiva QuirogaVincent Warmerdam

Discovering the cause: Tools for structure learning in R

Anne Helby Petersen

Simple Arrays

Davis Vaughan

Forecast Combination in R

Eran Raviv

genogeographer - a tool for ancestry informative markers

Torben Tvedebrink

Operations & data products

Programming 2

Numerical methods

Visualisation

Spatial data & maps

Bioinformatics 2

14:00

How a non-profit uses R for its daily operations

Francois Michonneau

Sustainable Package Development

Tomas Kalibera

Analysing results from Monte Carlo simulation studies using the rsimsum package and the INTEREST shiny app

Alessandro Gasparini

colorspace: A Toolbox for Manipulating and Assessing Color Palettes

Achim Zeileis

Strengthening of R in support of spatial data infrastructures management: geometa and ows4R packages

Emmanuel Blondel

Interfacing R/Bioconductor with Hail, a Spark-based platform for genomics

Michael Lawrence

14:18

rjenkins and rrundeck: Coordinating Continuous Integration and Delivery with R

Daan Seynaeve

Typing R

Elie Canonici Merle

Algorithmic Differentiation in R using the RcppEigenAD package

Robert Crouchley

Vegawidget: Composing and Rendering Interactive Vega(-Lite) Charts

Ian Lyttle

Resample-smoothing of Voronoi intensity estimators

Ege Rubak

iSEE: interactive and reproducible exploration and visualization of genomics data

Federico Marini

14:36

Advanced Git Integrations for Automating the Delivery of Reproducible Data Products in R

Kelly Obriant

nCompiler: C++ code-generation from R code

Perry De Valpine

Describing and solving differential equations with a new domain specific language, odin

Richard Fitzjohn

Visualising high-dimensional data: new developments of the tourr package using Shiny and plotly

Ursula Laa

Thematic mapping with "cartography"

Timothée Giraud

POMA: Shiny tool for targeted metabolomic data statistical analysis and visualization

Pol Castellano-Escuder

14:54

GitHub actions for R

Verena HeldMax Held

Mixed interactive debugging of R and native code with FastR and Vistual Studio Code

Zbynek Slajchrt

xstatR: an Environment for Running R and XLISP-STAT in Docker Containers

Jim Harner

Creating privacy protecting density maps: sdcSpatial

Edwin De Jonge

Keynote

16:00

How Bioconductor advances science while contributing to the R language and community

Martin Morgan

For the official useR 2019 website, including conference information and tutorial schedule, visit user2019.fr.

Friday

Friday
12 July 2019
Time Concorde 1+2 Cassiopée Caravelle 2 Saint-Exupéry Ariane 1+2 Guillaumet 1+2

Keynote

09:15

Tools for Model-Based Clustering in R

Bettina Grün

Shiny & web

Methods & applications

Models & methods

Switching to R

Bioinformatics & biostatistics

10:25

Native Chrome Automation using R

Christophe DervieuxRomain Lesur

fxtract - Feature Extraction from Grouped Data

Quay Au

Adjusting reviewer scores for a fairer assessment via multi-faceted Rasch modelling

Caterina Constantinescu

The transition from conventional tools in banking to R

Balazi Peter

rGSAn: a R package dedicated to the gene set analysis using semantic similarity measures.

Aarón Ayllón-BenítezPatricia Thebault

10:30

Our journey with Shiny : some packages to enhance your applications

Victor PerrierFanny Meyer

Spatial Optimisation with OSRM and R

Megan Beckett

Penalized regressions to study multivariate linear models : the VariSel package.

Marie Perrot-Dockès

R++, a new Graphical User Interface for R

Christophe Genolini

Pathway-VisualiseR: An Interactive Web Application for Visualising Gene Networks

Goknur GinerAlexandra Garnham

10:35

auth0: Secure Authentication in Shiny with Auth0

Julio Trecenti

Anomaly detection in trivago

Peter Brejcak

Maximum spacing estimation, a new method in fitdistrplus

Christophe Dutang

R in Pharma: A tailored approach to converting programmers to R in an industry resistant to change

Kieran Martin

Compiling a global database of sapflow measurements with R: Workflow and tools for the SAPFLUXNET database

Víctor Granda

10:40

Packaging shiny applications

Maxim Nazarov

Using R and the Tidyverse to Play Fantasy Baseball

Angeline Protacio

rama: an R interface to the GAMA agent-based modeling platform

Marc Choisy

Community Driven Data Science in Insurance

Kevin Kuo

Bayesian sequential integration within a preclinical PK/PD modeling framework using rstan package: Lessons learned

Fabiola La Gamba

10:45

Photon : Building an electron-shiny app using a simple RStudio add in.

Abbas Rizvi

Optimizing children sleeping time using regression and machine learning

Alicja Fras

RcppGreedySetCover: Scalable Set Cover

Kaeding Matthias

unconfUROS and one of its outputs vornoiTreemap

Alexander Kowarik

VICI: a Shiny app for accurate estimation of Vaccine Induced Cellular Immunogenicity with bivariate modeling

Boris Hejblum

10:50

Visualizing Huge Amounts of Fleet Data using Shiny and Leaflet

Andreas Wittmann

The GPareto and GPGame packages for multi and many objective Bayesian optimization

Mickaël Binois

An R implementation of a model-based estimator – a UK case study

Konstantinos Soulanis

Tools for 3D/4D interactive visualisation of cells and biological tissue

Marion Louveaux

10:55

Using advanced R packages for the visualisation of clinical data in a cancer hospital setting

Roxane Legaie

Analysis of laboratory test requests in a university hospital: A Shiny App for association analysis as a demand management tool

Deniz Topcu

Contribution & collaboration

Model deployment

Big/high dimensional data

Performance

Time series data

Biostatistics & epidemiology 2

11:30

How to win friends and write an open-source book

Jakub NowosadRobin Lovelace

Machine Learning Infrastructure at Netflix

Savin Goyal

prVis: a Novel Method for Visual Dimension Reduction

Norman MatloffTiffany JiangWenxuan ZhaoRobert Tucker

pak: a fresh approach to package installation

Gábor Csárdi

timeseriesdb - Manage, Process and Archive Time Series with R and PostgreSQL

Matthias Bannert

Implementation and analysis design of an adaptive-outcome trial in R

Alessio Crippa

11:48

Making sense of CRAN: Package and collaboration networks

Ioannis Kosmidis

Deploying machine learning models at scale

Angus Taylor

PLS for Big Data: A Unified Parallel Algorithm for Regularized Group PLS

Benoit Liquet

Summary of developments in R's data.table package

Arun Srinivasan

A feast of time series tools

Rob Hyndman

Advances in dose-response analysis

Christian RitzJens C. Streibig

12:06

RWsearch: a package for CRAN users and task view maintainers

Patrice Kiener

Serverless Computing for R

Christoph BodnerThomas Laber

multiDA and genDA: Discriminant analysis methods for large scale and complex datasets

Sarah Romanes

Real-time file import with the vroom package

Jim Hester

tsbox: Class-Agnostic Time Series

Christoph Sax

The next generation of the survival package

Terry Therneau

12:24

Translating datasets using "datalang": the development of "datos" package for the R4DS Spanish translation

Riva Quiroga

A DevOps process for deploying R to production

David Smith

compboost: Fast and Flexible Component-Wise Boosting Framework

Daniel Schalk

A Future for R: Simplified Parallel and Distributed Processing

Henrik Bengtsson

RJDemetra: an R interface to JDemetra+ seasonal adjustment software

Alain Quartier-La-Tente

A flexible approach to time-to-event data analysis using case-base sampling

Jesse Islam

12:42

R Consortium Working Groups

Joseph Rickert

Authentication and authorization in plumber with the sealr package

Friedrike Preu

How to speed-up VSURF (Variable Selection Using Random Forests)?

Robin Genuer

FastRCluster: running FastR from GNU-R

Stepan Sindelar

Experiences from dealing with missing values in sensor time series data

Steffen Moritz

The R package mixmeta: an extended mixed-effects framework for meta-analysis

Antonio Gasparrini

14:15

'AI for Good' in the R and Python ecosystems

Julien Cornebise

Keynote

For the official useR 2019 website, including conference information and tutorial schedule, visit user2019.fr.

Abstracts